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RankViaContact: ranking and visualization of amino acid contacts.

Author

Summary, in English

SUMMARY: RankViaContact is a web service for calculation of residue-residue contact energies in proteins based on a coarse-grained model, and for visualization of interactions. The service provides information about ranked contact energies of residues, coordination numbers and the relative solvent accessibility of selected residues, as well as sequence and structure information. The program can be used to design stabilizing mutations, to analyze residue-residue contacts and to study the consequences of mutations. AVAILABILITY: http://bioinf.uta.fi/Rank.htm.

Publishing year

2003

Language

English

Pages

2161-2162

Publication/Series

Bioinformatics

Volume

19

Issue

16

Document type

Journal article

Publisher

Oxford University Press

Topic

  • Bioinformatics and Systems Biology

Keywords

  • Amino Acids: chemistry
  • Amino Acids: classification
  • Proteins: chemistry
  • Proteins: classification

Status

Published

ISBN/ISSN/Other

  • ISSN: 1367-4803