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Sharing data between LSDBs and central repositories.

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Author

  • Johan T den Dunnen
  • Rolf H Sijmons
  • Paal S Andersen
  • Mauno Vihinen
  • Jacques S Beckmann
  • Sandro Rossetti
  • C Conover Talbot
  • Ross C Hardison
  • Sue Povey
  • Richard G H Cotton

Summary, in English

Several Locus-Specific DataBases (LSDBs) have recently been approached by larger, more general data repositories (including NCBI and UCSC) with the request to share the DNA variant data they have collected. Within the Human Genome Variation Society (HGVS) a document was generated summarizing the issues related to these requests. The document has been circulated in the HGVS/LSDB community and was discussed extensively. Here we summarize these discussions and present the concluded recommendations for LSDB data sharing with central repositories.

Publishing year

2009

Language

English

Pages

493-495

Publication/Series

Human Mutation

Volume

30

Issue

4

Document type

Journal article

Publisher

John Wiley & Sons Inc.

Topic

  • Medical Genetics

Keywords

  • Computational Biology: methods
  • Computational Biology: standards
  • Genome
  • Human: genetics

Status

Published

ISBN/ISSN/Other

  • ISSN: 1059-7794